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BioLayers Cell Atlas ยท Phase 1 Foundation

From Papers to Living Cells

Explore calibrated microscopy, multi-channel fluorophore staining, and quantitative morphology across verified oncology specimens. Every image is grounded in peer-reviewed literature and open-access provenance.

VERIFIED SPECIMENS3 Available
Modality:
Activated Human CAF under TGF-beta1 Induction
CONFOCAL
Flagship Study3 ch
PancreasCL:0000057

Cancer-Associated Fibroblast

Cancer-associated fibroblasts (CAFs) are prominent stromal cells in solid tumors. Upon activation by tumor-derived TGF-beta, CAFs undergo contractile transdifferentiation, produce dense collagenous extracellular matrix, and secrete immunosuppressive chemokines including CXCL12 (SDF-1) to exclude cytotoxic T lymphocytes from the tumor core.

Cell Line:Primary Human Pancreatic CAF / CAF-1
Staining:DAPI (Nuclei) / Alexa Fluor 488 (alpha-SMA) / Cy5 (CXCL12)
Accession:S-BIAD823 / BBBC039v1
CC-BY 4.0 InternationalView Cell Card
U2OS Nuclear Morphology High-Content Screen
FLUORESCENCE
1 ch
BoneCLO:0009458

U2OS Osteosarcoma

U2OS is a human osteosarcoma cell line extensively used in high-content screening and cellular morphology profiling. Cells maintain wild-type p53 and represent an established standard for high-throughput nuclear segmentation and phenotypic screening.

Cell Line:U2OS
Staining:Hoechst 33342 (DNA nuclear counterstain)
Accession:BBBC039v1
CC0 1.0 Universal Public DomainView Cell Card
GOWT1 Time-Lapse Cellular Migration Series
FLUORESCENCE
1 ch
Embryonic inner cell massCL:0002322

Mouse Stem Cell (Oct4-GFP)

GOWT1 mouse embryonic stem cells express an Oct4-GFP reporter transgene. This standard time-lapse microscopy dataset from the Cell Tracking Challenge enables rigorous evaluation of cell division, nuclear morphology dynamics, and directional motility.

Cell Line:GOWT1 (Oct4-GFP)
Staining:Oct4-GFP Fusion Protein (Endogenous live reporter)
Accession:CTC-Fluo-N2DH-GOWT1
Open Access Academic ResearchView Cell Card